BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E10SP1|AL428568
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1221 1488 0.0
>3x_Contig1221
Length = 4893
Score = 1488 bits (742), Expect = 0.0
Identities = 755/768 (98%)
Strand = Plus / Minus
Query: 1 gatctctgctctggaaaaaaatacacaaaacttcacagtagagaaactagaagaagttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3287 gatctctgctctggaaaaaaatacacaaaacttcacagtagagaaactagaagaagttta 3228
Query: 61 tgcatccatagccaacgtcatctggaacaatagactttcatgggacaaaacggatgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3227 tgcatccatagccaacgtcatctggaacaatagactttcatgggacaaaacggatgctct 3168
Query: 121 cgatcagttagaagggcttatcaagactttataaaagaatttctgtttatagaattatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3167 cgatcagttagaagggcttatcaagactttataaaagaatttctgtttatagaattatgg 3108
Query: 181 attttractaaacttcaactcatttaactatttacaagtgcatcaatttcagaacaggca 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3107 attttaactaaacttcaactcatttaactatttacaagtgcatcaatttcagaacaggca 3048
Query: 241 tctaacaactcgtaatcattaccgtgttgagagaatacttgaataccaaatgcgtgccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3047 tctaacaactcgtaatcattaccgtgttgagagaatacttgaataccaaatgcgtgccct 2988
Query: 301 gccggtacagtcattgttggragcccacataatgacatgggsattgtgaatatgtcattt 360
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2987 gccggtacagtcattgttggaagcccacataatgacatgggcattgtgaatatgtcattt 2928
Query: 361 atgtatgtrttcaaagggttttkrttctcctcgctcacaacttcatcataggtagtagga 420
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2927 atgtatgtattcaaagggtttttattctcctcgctcacaacttcatcataggtagtagga 2868
Query: 421 ratgaagttgaggttagggacaacatgatatcaacgccgtctttattaacagagttccca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2867 aatgaagttgaggttagggacaacatgatatcaacgccgtctttattaacagagttccca 2808
Query: 481 cttaacacatttgggaacctgaaagcccgatcaaagtcatttattagttggactcttagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2807 cttaacacatttgggaacctgaaagcccgatcaaagtcatttattagttggactcttagc 2748
Query: 541 ttttgagctttaatgtagttgttcttaaaggactctgagcataagttgtaatttcccaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2747 ttttgagctttaatgtagttgttcttaaaggactctgagcataagttgtaatttcccaag 2688
Query: 601 atgattctrtwttgaacttccggtccgaatgccgaccttgttggtgtaaataaagtacca 660
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2687 atgattctgttttgaacttccggtccgaatgccgaccttgttggtgtaaataaagtacca 2628
Query: 661 tcttcaacatcggattmtgctctataaccgtaccggrcaccmtcatatctggaaagatta 720
|||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 2627 tcttcaacatcggattctgctctataaccgtaccggacaccatcatatctggaaagatta 2568
Query: 721 gacactgcctcggcaggagacaacgtgtaataaatagatagtgcmttt 768
|||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2567 gacactgcctcggcaggagacaacgtgtaataaatagatagtgcattt 2520
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4659
Number of Sequences: 1807
Number of extensions: 4659
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)